I am using the Alternate Layouts feature to create different page sizes in my document (CS6). So I have one tabloid page and two letter size pages and each are given their own master and layout type. Printing the entire file at this point is very cumbersome because you have to specify each page. Is there a way to convert the alternate layout back to something standard so I can just print pages 1-3 and Adobe will recognize all pages as one single unit? I hope that makes sense. As it stands now I have to specify each layout I have created in order to print them which is kind of a pain.
You can try changing the view options in the pages panel to view horizonatally or view vertically rather than by alternate layout. I'd do this on a copy of the file, though, in case your numbering gets totally screwed up.