I'm afraid you have to prepare your own list based on your requirements. The list can range from changing the default passwords to dis-abling some jobs & servers.
with 5.6.1  you get Package to configure instance with best practices for production use.
Why you want to disable unused component Are you trying to address any performance issue?
Potentially. We do not have one right now, I was only looking into this to be preventive. For instance, we are not using any of the Scene7 stuff. Would it be recommended/or not to disable all these features?
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You are not recommended to remove any ootb-bundle. Maybe you can hide the features from the UI (either by ACL or by overlaying), if it's really annoying your editors.