What exactly do you need to do manually? Do you need to add the numbers, or do you need to amend them to make them work?
Also, before generation, are the settings correct in the RoboHelp project? (Project Set-up > Context-Sensitive Help > Map Files > All Map IDs) Or do you see the same problem in RoboHelp?
@Lucy_Kajimoto - you shouldn't have to edit that file at all. I use the FM to RH import route with CSH FM markers that have my mapid in them. The All Map IDs file in RH shows the linking between the FM marker mapid and the CSH # and topic just fine.
Thank you, William and Jeff, for your replies. You are correct – we do not need to edit the whcshdata.js file at all. To resolve this issue, we must “lock” the BSSCDefault.h file. When “unlocked,” this .h file auto-generates and sometimes changes the mapping.