Did you set your transparency blending space to CMYK?
Why are you using EPS? I would recommend not to use it anymore. Use AI, PDF or PSD instead.
Yes, I set my transparency blending space to CMYK. It didn't work.
I don't have a particular reason I am using an EPS over AI other than that's the type of file this object (logo) was saved as. I can get an AI. Is there any particular reason you recommend not using an EPS?
Postscript does not support color management nor transparency and is outdated.
Did you turn on the print preview in Acrobat when viewing the PDF?