I'm trying to take a png sequence animated in Character Animator and do motion tracking on two specific points on it in After Effects.
I'm applying the motion tracking feature on the png sequence, but it does not track anything at all.
The points on the character that need to be tracked are two GREEN rectangles.
Is there any way to fix this? Any help would be appreciated.
It sounds like you aren't setting up your track properly. Here's a tutorial I made last week for another forum user about motion tracking. It addressed the users' specific concern, but this should be broad enough for your purposes, as well: Motion tracking Knoll Light Factory EZ in Adobe After Effects - YouTube
Apparently I did my track set up right, but I kept doing regular preview as opposed to actually analyzing it. I guess it was force of habit even though I thought I was clicking the right one.
After I got that working, I used the rest of your video to finish the process.