Can you provide more of an explanation? I suspect you may not be comfortable writing in English, so fell free to try another language and we'll try to translate on this end.
integrate automatically in my Indesign document the colors and the colors references.
This is a guess, but do you want to change the InDesign application's default colors and swatches? If that's the case close all documents, set the swatches and color panels to reflect your preference, and restart InDesign. Now all new documents will start with your swatches as the default,