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Moving to After Effects forum
We have done this many times. Create graphics in Illustrator using several layers. Then in After effects, Import File, choose the AI file and select Composition. Usually works just fine. All layers are imported separately and each one can be animated n the timeline.
Today the file imports in a folder but no layers. Tried it several times on two different computers in the office. The file I'm trying to import below has 15 layers.
Show us a full screenshot of your Ai interface so we can examine your Ai setup prior to the import process. Don't crop screenshots as they can hold valuable information
Sorry for this issue. Did you ever find a solution? Please let us know if you have or if you still need help.